<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "https://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<html xmlns="http://www.w3.org/1999/xhtml">
<head>
<meta http-equiv="Content-Type" content="text/xhtml;charset=UTF-8"/>
<meta http-equiv="X-UA-Compatible" content="IE=9"/>
<meta name="generator" content="Doxygen 1.8.17"/>
<meta name="viewport" content="width=device-width, initial-scale=1"/>
<title>libBigWig: bwValues.h Source File</title>
<link href="tabs.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="jquery.js"></script>
<script type="text/javascript" src="dynsections.js"></script>
<link href="search/search.css" rel="stylesheet" type="text/css"/>
<script type="text/javascript" src="search/searchdata.js"></script>
<script type="text/javascript" src="search/search.js"></script>
<link href="doxygen.css" rel="stylesheet" type="text/css" />
</head>
<body>
<div id="top"><!-- do not remove this div, it is closed by doxygen! -->
<div id="titlearea">
<table cellspacing="0" cellpadding="0">
 <tbody>
 <tr style="height: 56px;">
  <td id="projectalign" style="padding-left: 0.5em;">
   <div id="projectname">libBigWig
   </div>
  </td>
 </tr>
 </tbody>
</table>
</div>
<!-- end header part -->
<!-- Generated by Doxygen 1.8.17 -->
<script type="text/javascript">
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
var searchBox = new SearchBox("searchBox", "search",false,'Search');
/* @license-end */
</script>
<script type="text/javascript" src="menudata.js"></script>
<script type="text/javascript" src="menu.js"></script>
<script type="text/javascript">
/* @license magnet:?xt=urn:btih:cf05388f2679ee054f2beb29a391d25f4e673ac3&amp;dn=gpl-2.0.txt GPL-v2 */
$(function() {
  initMenu('',true,false,'search.php','Search');
  $(document).ready(function() { init_search(); });
});
/* @license-end */</script>
<div id="main-nav"></div>
</div><!-- top -->
<!-- window showing the filter options -->
<div id="MSearchSelectWindow"
     onmouseover="return searchBox.OnSearchSelectShow()"
     onmouseout="return searchBox.OnSearchSelectHide()"
     onkeydown="return searchBox.OnSearchSelectKey(event)">
</div>

<!-- iframe showing the search results (closed by default) -->
<div id="MSearchResultsWindow">
<iframe src="javascript:void(0)" frameborder="0" 
        name="MSearchResults" id="MSearchResults">
</iframe>
</div>

<div class="header">
  <div class="headertitle">
<div class="title">bwValues.h</div>  </div>
</div><!--header-->
<div class="contents">
<a href="bwValues_8h.html">Go to the documentation of this file.</a><div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno">    1</span>&#160;<span class="preprocessor">#ifndef LIBBIGWIG_VALUES_H</span></div>
<div class="line"><a name="l00002"></a><span class="lineno">    2</span>&#160;<span class="preprocessor">#define LIBBIGWIG_VALUES_H</span></div>
<div class="line"><a name="l00003"></a><span class="lineno">    3</span>&#160; </div>
<div class="line"><a name="l00004"></a><span class="lineno">    4</span>&#160;<span class="preprocessor">#include &lt;inttypes.h&gt;</span></div>
<div class="line"><a name="l00012"></a><span class="lineno">   12</span>&#160;<span class="comment">//N.B., coordinates are still 0-based half open!</span></div>
<div class="line"><a name="l00020"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html">   20</a></span>&#160;<span class="comment"></span><span class="keyword">typedef</span> <span class="keyword">struct </span><a class="code" href="structbwRTreeNode__t.html">bwRTreeNode_t</a> {</div>
<div class="line"><a name="l00021"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#aa2dac9df29c6b9eaaf4000e70f3e1540">   21</a></span>&#160;    uint8_t <a class="code" href="structbwRTreeNode__t.html#aa2dac9df29c6b9eaaf4000e70f3e1540">isLeaf</a>; </div>
<div class="line"><a name="l00022"></a><span class="lineno">   22</span>&#160;    <span class="comment">//1 byte of padding</span></div>
<div class="line"><a name="l00023"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#a286f78e61ff30c50a6b862a62dac119c">   23</a></span>&#160;    uint16_t <a class="code" href="structbwRTreeNode__t.html#a286f78e61ff30c50a6b862a62dac119c">nChildren</a>; </div>
<div class="line"><a name="l00024"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#a39f6795d06ac6d532c6673d9ec456635">   24</a></span>&#160;    uint32_t *<a class="code" href="structbwRTreeNode__t.html#a39f6795d06ac6d532c6673d9ec456635">chrIdxStart</a>; </div>
<div class="line"><a name="l00025"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#af8a64d389746640ca8b67a0e060792c4">   25</a></span>&#160;    uint32_t *<a class="code" href="structbwRTreeNode__t.html#af8a64d389746640ca8b67a0e060792c4">baseStart</a>; </div>
<div class="line"><a name="l00026"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#a618ace340992c3a00c1f02e6f4e89381">   26</a></span>&#160;    uint32_t *<a class="code" href="structbwRTreeNode__t.html#a618ace340992c3a00c1f02e6f4e89381">chrIdxEnd</a>; </div>
<div class="line"><a name="l00027"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#a2780034368ea3ec077c2b6d7bf16aff6">   27</a></span>&#160;    uint32_t *<a class="code" href="structbwRTreeNode__t.html#a2780034368ea3ec077c2b6d7bf16aff6">baseEnd</a>; </div>
<div class="line"><a name="l00028"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#a8d0838a23fbd7164322ef2ee74a63418">   28</a></span>&#160;    uint64_t *<a class="code" href="structbwRTreeNode__t.html#a8d0838a23fbd7164322ef2ee74a63418">dataOffset</a>; </div>
<div class="line"><a name="l00029"></a><span class="lineno">   29</span>&#160;    <span class="keyword">union </span>{</div>
<div class="line"><a name="l00030"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#ad5b7bd4b20a5eab86d6f74bded36800b">   30</a></span>&#160;        uint64_t *<a class="code" href="structbwRTreeNode__t.html#ad5b7bd4b20a5eab86d6f74bded36800b">size</a>; </div>
<div class="line"><a name="l00031"></a><span class="lineno"><a class="line" href="structbwRTreeNode__t.html#aeda9708050f25cd445d10ebce2540a06">   31</a></span>&#160;        <span class="keyword">struct </span><a class="code" href="structbwRTreeNode__t.html">bwRTreeNode_t</a> **<a class="code" href="structbwRTreeNode__t.html#aeda9708050f25cd445d10ebce2540a06">child</a>; </div>
<div class="line"><a name="l00032"></a><span class="lineno">   32</span>&#160;    } <a class="code" href="structbwRTreeNode__t.html#af9caccee1915cb22f50b0b794847317d">x</a>; </div>
<div class="line"><a name="l00033"></a><span class="lineno">   33</span>&#160;} <a class="code" href="bwValues_8h.html#ad63f44487c3d9f6ab2b663ba91ccf590">bwRTreeNode_t</a>;</div>
<div class="line"><a name="l00034"></a><span class="lineno">   34</span>&#160; </div>
<div class="line"><a name="l00038"></a><span class="lineno">   38</span>&#160;<span class="comment">//TODO rootOffset is pointless, it&#39;s 48bytes after the indexOffset</span></div>
<div class="line"><a name="l00039"></a><span class="lineno"><a class="line" href="structbwRTree__t.html">   39</a></span>&#160;<span class="keyword">typedef</span> <span class="keyword">struct </span>{</div>
<div class="line"><a name="l00040"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#a430220a665cfcc8c76e372dc8f221b2f">   40</a></span>&#160;    uint32_t <a class="code" href="structbwRTree__t.html#a430220a665cfcc8c76e372dc8f221b2f">blockSize</a>; </div>
<div class="line"><a name="l00041"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#a5f07bf1ea36552d70a59a1c7aea3a329">   41</a></span>&#160;    uint64_t <a class="code" href="structbwRTree__t.html#a5f07bf1ea36552d70a59a1c7aea3a329">nItems</a>; </div>
<div class="line"><a name="l00042"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#a3a5289849d34bc738f2d45e121f1c8b3">   42</a></span>&#160;    uint32_t <a class="code" href="structbwRTree__t.html#a3a5289849d34bc738f2d45e121f1c8b3">chrIdxStart</a>; </div>
<div class="line"><a name="l00043"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#adde0db0e9555b457c074d1eacae1c02f">   43</a></span>&#160;    uint32_t <a class="code" href="structbwRTree__t.html#adde0db0e9555b457c074d1eacae1c02f">baseStart</a>; </div>
<div class="line"><a name="l00044"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#a50c877d3f3a8a5994ccdfe58d2dd0e85">   44</a></span>&#160;    uint32_t <a class="code" href="structbwRTree__t.html#a50c877d3f3a8a5994ccdfe58d2dd0e85">chrIdxEnd</a>; </div>
<div class="line"><a name="l00045"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#a656f53ca34361b368fc3fd1710f0de42">   45</a></span>&#160;    uint32_t <a class="code" href="structbwRTree__t.html#a656f53ca34361b368fc3fd1710f0de42">baseEnd</a>; </div>
<div class="line"><a name="l00046"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#a119af9ef30b2923ccb7e4ae8a6d3b501">   46</a></span>&#160;    uint64_t <a class="code" href="structbwRTree__t.html#a119af9ef30b2923ccb7e4ae8a6d3b501">idxSize</a>; </div>
<div class="line"><a name="l00047"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#af339ad528e3ed973bd454123fbded262">   47</a></span>&#160;    uint32_t <a class="code" href="structbwRTree__t.html#af339ad528e3ed973bd454123fbded262">nItemsPerSlot</a>; </div>
<div class="line"><a name="l00048"></a><span class="lineno">   48</span>&#160;    <span class="comment">//There&#39;s 4 bytes of padding in the file here</span></div>
<div class="line"><a name="l00049"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#aa3e57a494e0c45d56dca1de0939e8197">   49</a></span>&#160;    uint64_t <a class="code" href="structbwRTree__t.html#aa3e57a494e0c45d56dca1de0939e8197">rootOffset</a>; </div>
<div class="line"><a name="l00050"></a><span class="lineno"><a class="line" href="structbwRTree__t.html#ad4566d3fdd23ac4918104d23c77a7ddb">   50</a></span>&#160;    <a class="code" href="structbwRTreeNode__t.html">bwRTreeNode_t</a> *<a class="code" href="structbwRTree__t.html#ad4566d3fdd23ac4918104d23c77a7ddb">root</a>; </div>
<div class="line"><a name="l00051"></a><span class="lineno">   51</span>&#160;} <a class="code" href="structbwRTree__t.html">bwRTree_t</a>;</div>
<div class="line"><a name="l00052"></a><span class="lineno">   52</span>&#160; </div>
<div class="line"><a name="l00056"></a><span class="lineno"><a class="line" href="structbwOverlapBlock__t.html">   56</a></span>&#160;<span class="keyword">typedef</span> <span class="keyword">struct </span>{</div>
<div class="line"><a name="l00057"></a><span class="lineno"><a class="line" href="structbwOverlapBlock__t.html#a595c8baef7fa72900b4347083f4c9761">   57</a></span>&#160;    uint64_t <a class="code" href="structbwOverlapBlock__t.html#a595c8baef7fa72900b4347083f4c9761">n</a>; </div>
<div class="line"><a name="l00058"></a><span class="lineno"><a class="line" href="structbwOverlapBlock__t.html#a0bfe76443d7c7bcb60e666eb04594f94">   58</a></span>&#160;    uint64_t *<a class="code" href="structbwOverlapBlock__t.html#a0bfe76443d7c7bcb60e666eb04594f94">offset</a>; </div>
<div class="line"><a name="l00059"></a><span class="lineno"><a class="line" href="structbwOverlapBlock__t.html#a5d9d53ceb7b2ca51db69b8c27bafeac6">   59</a></span>&#160;    uint64_t *<a class="code" href="structbwOverlapBlock__t.html#a5d9d53ceb7b2ca51db69b8c27bafeac6">size</a>; </div>
<div class="line"><a name="l00060"></a><span class="lineno">   60</span>&#160;} <a class="code" href="structbwOverlapBlock__t.html">bwOverlapBlock_t</a>;</div>
<div class="line"><a name="l00061"></a><span class="lineno">   61</span>&#160; </div>
<div class="line"><a name="l00067"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html">   67</a></span>&#160;<span class="keyword">typedef</span> <span class="keyword">struct </span>{</div>
<div class="line"><a name="l00068"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#a44b09f0b98af0b93ec4348357ad51d98">   68</a></span>&#160;    uint32_t <a class="code" href="structbwDataHeader__t.html#a44b09f0b98af0b93ec4348357ad51d98">tid</a>; </div>
<div class="line"><a name="l00069"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#ac9a3b29aff03cece0896d7f76f68f8c5">   69</a></span>&#160;    uint32_t <a class="code" href="structbwDataHeader__t.html#ac9a3b29aff03cece0896d7f76f68f8c5">start</a>; </div>
<div class="line"><a name="l00070"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#a4512ac08141a2f5634c4b3e0dea27f1b">   70</a></span>&#160;    uint32_t <a class="code" href="structbwDataHeader__t.html#a4512ac08141a2f5634c4b3e0dea27f1b">end</a>; </div>
<div class="line"><a name="l00071"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#a3e94aba6b9fcd5e95e8661b2e149ccd1">   71</a></span>&#160;    uint32_t <a class="code" href="structbwDataHeader__t.html#a3e94aba6b9fcd5e95e8661b2e149ccd1">step</a>; </div>
<div class="line"><a name="l00072"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#ad702b73bfd38ad0c0e7ae69b02e2d9b8">   72</a></span>&#160;    uint32_t <a class="code" href="structbwDataHeader__t.html#ad702b73bfd38ad0c0e7ae69b02e2d9b8">span</a>; </div>
<div class="line"><a name="l00073"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#a77294dce47a8154444baf1a1a1321af4">   73</a></span>&#160;    uint8_t <a class="code" href="structbwDataHeader__t.html#a77294dce47a8154444baf1a1a1321af4">type</a>; </div>
<div class="line"><a name="l00074"></a><span class="lineno"><a class="line" href="structbwDataHeader__t.html#ab11457644d7f5c3590eebeb2696e389c">   74</a></span>&#160;    uint16_t <a class="code" href="structbwDataHeader__t.html#ab11457644d7f5c3590eebeb2696e389c">nItems</a>; </div>
<div class="line"><a name="l00075"></a><span class="lineno">   75</span>&#160;} <a class="code" href="structbwDataHeader__t.html">bwDataHeader_t</a>;</div>
<div class="line"><a name="l00076"></a><span class="lineno">   76</span>&#160; </div>
<div class="line"><a name="l00077"></a><span class="lineno">   77</span>&#160;<span class="preprocessor">#endif // LIBBIGWIG_VALUES_H</span></div>
</div><!-- fragment --></div><!-- contents -->
<div class="ttc" id="astructbwRTreeNode__t_html_a286f78e61ff30c50a6b862a62dac119c"><div class="ttname"><a href="structbwRTreeNode__t.html#a286f78e61ff30c50a6b862a62dac119c">bwRTreeNode_t::nChildren</a></div><div class="ttdeci">uint16_t nChildren</div><div class="ttdef"><b>Definition:</b> bwValues.h:23</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_a618ace340992c3a00c1f02e6f4e89381"><div class="ttname"><a href="structbwRTreeNode__t.html#a618ace340992c3a00c1f02e6f4e89381">bwRTreeNode_t::chrIdxEnd</a></div><div class="ttdeci">uint32_t * chrIdxEnd</div><div class="ttdef"><b>Definition:</b> bwValues.h:26</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html"><div class="ttname"><a href="structbwRTreeNode__t.html">bwRTreeNode_t</a></div><div class="ttdoc">A node within an R-tree holding the index for data.</div><div class="ttdef"><b>Definition:</b> bwValues.h:20</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_af9caccee1915cb22f50b0b794847317d"><div class="ttname"><a href="structbwRTreeNode__t.html#af9caccee1915cb22f50b0b794847317d">bwRTreeNode_t::x</a></div><div class="ttdeci">union bwRTreeNode_t::@1 x</div></div>
<div class="ttc" id="astructbwOverlapBlock__t_html_a5d9d53ceb7b2ca51db69b8c27bafeac6"><div class="ttname"><a href="structbwOverlapBlock__t.html#a5d9d53ceb7b2ca51db69b8c27bafeac6">bwOverlapBlock_t::size</a></div><div class="ttdeci">uint64_t * size</div><div class="ttdef"><b>Definition:</b> bwValues.h:59</div></div>
<div class="ttc" id="astructbwDataHeader__t_html"><div class="ttname"><a href="structbwDataHeader__t.html">bwDataHeader_t</a></div><div class="ttdoc">The header section of a given data block.</div><div class="ttdef"><b>Definition:</b> bwValues.h:67</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_a3e94aba6b9fcd5e95e8661b2e149ccd1"><div class="ttname"><a href="structbwDataHeader__t.html#a3e94aba6b9fcd5e95e8661b2e149ccd1">bwDataHeader_t::step</a></div><div class="ttdeci">uint32_t step</div><div class="ttdef"><b>Definition:</b> bwValues.h:71</div></div>
<div class="ttc" id="astructbwRTree__t_html_a430220a665cfcc8c76e372dc8f221b2f"><div class="ttname"><a href="structbwRTree__t.html#a430220a665cfcc8c76e372dc8f221b2f">bwRTree_t::blockSize</a></div><div class="ttdeci">uint32_t blockSize</div><div class="ttdef"><b>Definition:</b> bwValues.h:40</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_a2780034368ea3ec077c2b6d7bf16aff6"><div class="ttname"><a href="structbwRTreeNode__t.html#a2780034368ea3ec077c2b6d7bf16aff6">bwRTreeNode_t::baseEnd</a></div><div class="ttdeci">uint32_t * baseEnd</div><div class="ttdef"><b>Definition:</b> bwValues.h:27</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_a8d0838a23fbd7164322ef2ee74a63418"><div class="ttname"><a href="structbwRTreeNode__t.html#a8d0838a23fbd7164322ef2ee74a63418">bwRTreeNode_t::dataOffset</a></div><div class="ttdeci">uint64_t * dataOffset</div><div class="ttdef"><b>Definition:</b> bwValues.h:28</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_ab11457644d7f5c3590eebeb2696e389c"><div class="ttname"><a href="structbwDataHeader__t.html#ab11457644d7f5c3590eebeb2696e389c">bwDataHeader_t::nItems</a></div><div class="ttdeci">uint16_t nItems</div><div class="ttdef"><b>Definition:</b> bwValues.h:74</div></div>
<div class="ttc" id="abwValues_8h_html_ad63f44487c3d9f6ab2b663ba91ccf590"><div class="ttname"><a href="bwValues_8h.html#ad63f44487c3d9f6ab2b663ba91ccf590">bwRTreeNode_t</a></div><div class="ttdeci">struct bwRTreeNode_t bwRTreeNode_t</div><div class="ttdoc">A node within an R-tree holding the index for data.</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_a77294dce47a8154444baf1a1a1321af4"><div class="ttname"><a href="structbwDataHeader__t.html#a77294dce47a8154444baf1a1a1321af4">bwDataHeader_t::type</a></div><div class="ttdeci">uint8_t type</div><div class="ttdef"><b>Definition:</b> bwValues.h:73</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_ad702b73bfd38ad0c0e7ae69b02e2d9b8"><div class="ttname"><a href="structbwDataHeader__t.html#ad702b73bfd38ad0c0e7ae69b02e2d9b8">bwDataHeader_t::span</a></div><div class="ttdeci">uint32_t span</div><div class="ttdef"><b>Definition:</b> bwValues.h:72</div></div>
<div class="ttc" id="astructbwRTree__t_html"><div class="ttname"><a href="structbwRTree__t.html">bwRTree_t</a></div><div class="ttdef"><b>Definition:</b> bwValues.h:39</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_ad5b7bd4b20a5eab86d6f74bded36800b"><div class="ttname"><a href="structbwRTreeNode__t.html#ad5b7bd4b20a5eab86d6f74bded36800b">bwRTreeNode_t::size</a></div><div class="ttdeci">uint64_t * size</div><div class="ttdef"><b>Definition:</b> bwValues.h:30</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_a39f6795d06ac6d532c6673d9ec456635"><div class="ttname"><a href="structbwRTreeNode__t.html#a39f6795d06ac6d532c6673d9ec456635">bwRTreeNode_t::chrIdxStart</a></div><div class="ttdeci">uint32_t * chrIdxStart</div><div class="ttdef"><b>Definition:</b> bwValues.h:24</div></div>
<div class="ttc" id="astructbwRTree__t_html_adde0db0e9555b457c074d1eacae1c02f"><div class="ttname"><a href="structbwRTree__t.html#adde0db0e9555b457c074d1eacae1c02f">bwRTree_t::baseStart</a></div><div class="ttdeci">uint32_t baseStart</div><div class="ttdef"><b>Definition:</b> bwValues.h:43</div></div>
<div class="ttc" id="astructbwOverlapBlock__t_html"><div class="ttname"><a href="structbwOverlapBlock__t.html">bwOverlapBlock_t</a></div><div class="ttdoc">This structure holds the data blocks that overlap a given interval.</div><div class="ttdef"><b>Definition:</b> bwValues.h:56</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_af8a64d389746640ca8b67a0e060792c4"><div class="ttname"><a href="structbwRTreeNode__t.html#af8a64d389746640ca8b67a0e060792c4">bwRTreeNode_t::baseStart</a></div><div class="ttdeci">uint32_t * baseStart</div><div class="ttdef"><b>Definition:</b> bwValues.h:25</div></div>
<div class="ttc" id="astructbwRTree__t_html_a5f07bf1ea36552d70a59a1c7aea3a329"><div class="ttname"><a href="structbwRTree__t.html#a5f07bf1ea36552d70a59a1c7aea3a329">bwRTree_t::nItems</a></div><div class="ttdeci">uint64_t nItems</div><div class="ttdef"><b>Definition:</b> bwValues.h:41</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_ac9a3b29aff03cece0896d7f76f68f8c5"><div class="ttname"><a href="structbwDataHeader__t.html#ac9a3b29aff03cece0896d7f76f68f8c5">bwDataHeader_t::start</a></div><div class="ttdeci">uint32_t start</div><div class="ttdef"><b>Definition:</b> bwValues.h:69</div></div>
<div class="ttc" id="astructbwOverlapBlock__t_html_a595c8baef7fa72900b4347083f4c9761"><div class="ttname"><a href="structbwOverlapBlock__t.html#a595c8baef7fa72900b4347083f4c9761">bwOverlapBlock_t::n</a></div><div class="ttdeci">uint64_t n</div><div class="ttdef"><b>Definition:</b> bwValues.h:57</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_a4512ac08141a2f5634c4b3e0dea27f1b"><div class="ttname"><a href="structbwDataHeader__t.html#a4512ac08141a2f5634c4b3e0dea27f1b">bwDataHeader_t::end</a></div><div class="ttdeci">uint32_t end</div><div class="ttdef"><b>Definition:</b> bwValues.h:70</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_aeda9708050f25cd445d10ebce2540a06"><div class="ttname"><a href="structbwRTreeNode__t.html#aeda9708050f25cd445d10ebce2540a06">bwRTreeNode_t::child</a></div><div class="ttdeci">struct bwRTreeNode_t ** child</div><div class="ttdef"><b>Definition:</b> bwValues.h:31</div></div>
<div class="ttc" id="astructbwRTree__t_html_a50c877d3f3a8a5994ccdfe58d2dd0e85"><div class="ttname"><a href="structbwRTree__t.html#a50c877d3f3a8a5994ccdfe58d2dd0e85">bwRTree_t::chrIdxEnd</a></div><div class="ttdeci">uint32_t chrIdxEnd</div><div class="ttdef"><b>Definition:</b> bwValues.h:44</div></div>
<div class="ttc" id="astructbwRTreeNode__t_html_aa2dac9df29c6b9eaaf4000e70f3e1540"><div class="ttname"><a href="structbwRTreeNode__t.html#aa2dac9df29c6b9eaaf4000e70f3e1540">bwRTreeNode_t::isLeaf</a></div><div class="ttdeci">uint8_t isLeaf</div><div class="ttdef"><b>Definition:</b> bwValues.h:21</div></div>
<div class="ttc" id="astructbwRTree__t_html_ad4566d3fdd23ac4918104d23c77a7ddb"><div class="ttname"><a href="structbwRTree__t.html#ad4566d3fdd23ac4918104d23c77a7ddb">bwRTree_t::root</a></div><div class="ttdeci">bwRTreeNode_t * root</div><div class="ttdef"><b>Definition:</b> bwValues.h:50</div></div>
<div class="ttc" id="astructbwRTree__t_html_af339ad528e3ed973bd454123fbded262"><div class="ttname"><a href="structbwRTree__t.html#af339ad528e3ed973bd454123fbded262">bwRTree_t::nItemsPerSlot</a></div><div class="ttdeci">uint32_t nItemsPerSlot</div><div class="ttdef"><b>Definition:</b> bwValues.h:47</div></div>
<div class="ttc" id="astructbwRTree__t_html_a3a5289849d34bc738f2d45e121f1c8b3"><div class="ttname"><a href="structbwRTree__t.html#a3a5289849d34bc738f2d45e121f1c8b3">bwRTree_t::chrIdxStart</a></div><div class="ttdeci">uint32_t chrIdxStart</div><div class="ttdef"><b>Definition:</b> bwValues.h:42</div></div>
<div class="ttc" id="astructbwRTree__t_html_aa3e57a494e0c45d56dca1de0939e8197"><div class="ttname"><a href="structbwRTree__t.html#aa3e57a494e0c45d56dca1de0939e8197">bwRTree_t::rootOffset</a></div><div class="ttdeci">uint64_t rootOffset</div><div class="ttdef"><b>Definition:</b> bwValues.h:49</div></div>
<div class="ttc" id="astructbwDataHeader__t_html_a44b09f0b98af0b93ec4348357ad51d98"><div class="ttname"><a href="structbwDataHeader__t.html#a44b09f0b98af0b93ec4348357ad51d98">bwDataHeader_t::tid</a></div><div class="ttdeci">uint32_t tid</div><div class="ttdef"><b>Definition:</b> bwValues.h:68</div></div>
<div class="ttc" id="astructbwRTree__t_html_a119af9ef30b2923ccb7e4ae8a6d3b501"><div class="ttname"><a href="structbwRTree__t.html#a119af9ef30b2923ccb7e4ae8a6d3b501">bwRTree_t::idxSize</a></div><div class="ttdeci">uint64_t idxSize</div><div class="ttdef"><b>Definition:</b> bwValues.h:46</div></div>
<div class="ttc" id="astructbwOverlapBlock__t_html_a0bfe76443d7c7bcb60e666eb04594f94"><div class="ttname"><a href="structbwOverlapBlock__t.html#a0bfe76443d7c7bcb60e666eb04594f94">bwOverlapBlock_t::offset</a></div><div class="ttdeci">uint64_t * offset</div><div class="ttdef"><b>Definition:</b> bwValues.h:58</div></div>
<div class="ttc" id="astructbwRTree__t_html_a656f53ca34361b368fc3fd1710f0de42"><div class="ttname"><a href="structbwRTree__t.html#a656f53ca34361b368fc3fd1710f0de42">bwRTree_t::baseEnd</a></div><div class="ttdeci">uint32_t baseEnd</div><div class="ttdef"><b>Definition:</b> bwValues.h:45</div></div>
<!-- start footer part -->
<hr class="footer"/><address class="footer"><small>
Generated on Sun Nov 8 2020 13:48:36 for libBigWig by &#160;<a href="http://www.doxygen.org/index.html">
<img class="footer" src="doxygen.png" alt="doxygen"/>
</a> 1.8.17
</small></address>
</body>
</html>
